PhaseTank

Phase siRNAs (phasiRNAs) are a class of small RNAs, which triggered by miRNA-targeted cleavage and followed by DCL4-mediated production of small RNAs phased in 21-nt increments.
Here, we introduce PhaseTank to systematically characterize 'miRNA → mRNA → tasiRNA → target genes' regulatory casacades in plants. With one command analysis, PhaseTank is an easy-to-use software for users.

Project Activity

See All Activity >

License

GNU General Public License version 3.0 (GPLv3)

Follow PhaseTank

PhaseTank Web Site

Other Useful Business Software

Already Paying for an RMM? Get 50% Off Splashtop AEM

Switch to Splashtop AEM and save up to 50% in your first year

Automated OS and third-party patching for Windows and macOS, CVE prioritization with AI patch summaries, and built-in remote control that also supports Linux. Qualifying organizations switching from another RMM get up to 50% off year one.

Get Started

Rate This Project

User Reviews

Be the first to post a review of PhaseTank!

Additional Project Details

Operating Systems

Linux

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Bio-Informatics Software

Registered

2014-04-15

Similar Business Software

QIAGEN CLC Genomics Workbench

QIAGEN CLC Genomics Workbench is a powerful solution that works for everyone, no matter the workflow. Cutting-edge technology and unique features and algorithms widely used by scientific leaders in industry and academia make it easy to overcome challenges associated with data analysis....

See Software for QIAGEN CLC Genomics Workbench
OmnibusX

In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate...

See Software for OmnibusX
Photo51

Photo51 is a web-based molecular biology suite for designing and analyzing DNA and protein sequences. It supports plasmid design, automated feature annotation, virtual cloning, PCR primer design and virtual agarose gel electrophoresis. Researchers can import sequence files and use an integrated...

See Software for Photo51
GenomeStudio

Visualize and analyze data generated on Illumina array platforms with GenomeStudio Software. This powerful solution supports the genotyping analysis of microarray data. Performance-optimized tools and a user-friendly graphical interface enable you to convert data into meaningful results quickly...

See Software for GenomeStudio
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software for Geneious
AlphaGenome

AlphaGenome is a Google DeepMind API and Python toolkit for computational genomics research. Researchers submit DNA sequences or genetic variants to obtain model predictions about gene expression, RNA splicing, chromatin accessibility, transcription-factor binding, histone marks, and genome...

See Software for AlphaGenome